---
title: "Flex Dashboard"
output: 
  flexdashboard::flex_dashboard:
    orientation: columns
    vertical_layout: fill
    source_code: embed
---
```{r setup, include=FALSE}
library(flexdashboard)
library(tidyverse)
library(plotly)
library(rgdal)
library(sf)
library(viridis)

theme_set(theme_minimal() + theme(legend.position = "bottom"))
options(
  ggplot2.continuous.colour = "viridis",

  ggplot2.continuous.fill = "viridis"
)
scale_colour_discrete = scale_colour_viridis_d
scale_fill_discrete = scale_fill_viridis_d

covid_death_sdf1 = st_read("deathrate_map1.shp")
```

Column {data-width=600}
-----------------------------------------------------------------------

### Chart A
    
```{r, echo = FALSE}
cum_incidence_plot = ggplot(covid_death_sdf1) +
    geom_sf(aes(fill = incidence)) +
    theme(legend.text = element_text(size = 4), 
        legend.position = 'right', axis.text.x = element_text(angle = 45)) +
    labs(
    title = "Covid-19 Cumulative Incidence\nfrom March - September 2020 by ZCTA",
    x = "Latitude",
    y = "Longitude", fill = "Covid-19 Incidence\n (Cases/100,000)")

ggplotly(cum_incidence_plot)

```
   
Column {data-width=400}
-----------------------------------------------------------------------

### Chart B

```{r, echo = FALSE}
ggplotly(
  ggplot(covid_death_sdf1) +
    geom_sf(aes(fill = cum_death)) +
    theme(legend.text = element_text(size = 4), 
        legend.position = 'right', axis.text.x = element_text(angle = 45)) +
    labs(
    title = "Cumulative Moraltiy Rate\nfrom March - September 2020 by ZCTA",
    x = "Latitude",
    y = "Longitude", fill = "Mortality Rate\n (Deaths/100,000)")) 
```   
 
### Chart C
    
```{r, echo = FALSE}
ggplotly(
  ggplot(covid_death_sdf1) +
    geom_sf(aes(fill = pro_offers)) +
    theme(legend.text = element_text(size = 4), 
        legend.position = 'right', axis.text.x = element_text(angle = 45)) +
    labs(
    title = "Proportion of SHSAT Offers in 2020 by ZCTA",
    x = "Latitude",
    y = "Longitude", fill = "Proportion of SHSAT Offers")) 
```

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